Protein ZmSIG9
ZmSIG9 is a protein in the Sigma70-like family.
Information
TF Name: ZmSIG9
Species: Maize
TF Family: Sigma70-like
Gene Name(Synonym): SIG1A
Uniprot ID: B4FP19
Subgenome: 1

Protein ZmSIG9

ZmSIG9 is a protein in the Sigma70-like family.

Overview of domains present in v5 transcripts
PF04539PF04542PF04545
Zm00001eb415360_T003
Zm00001eb415360_T001
Zm00001eb415360_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d024507DAPseq no logo sequence fimo position
Zm00001d024507DAPseq no logo sequence fimo position
Zm00001d024507ChIPseq no logo sequence fimo position
Zm00001d024507PChIPseq no logo sequence fimo position

Interactions where ZmSIG9 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmSIG9 is the target  
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There are 88 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb415360_T003 from maize genome v5

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04539
PF04545
PF04542
PF04539
PF04545
PF04545
PF04539
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Nucleotide Sequence
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GAGGGGGAAGACGAGGCCACAAGGC...

GRMZM2G006736_T01 from maize genome v3


Related TFome: pUT5742

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

Nucleotide Sequence
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CACCAATGGGCAATGGCCTCGCGCC...

GRMZM2G006736_T02 from maize genome v3

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

Nucleotide Sequence
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CCTCTCCTCTCAGCTCCCTTCCCGG...

GRMZM2G006736_T03 from maize genome v3

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

Nucleotide Sequence
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CACCAATGGGCAATGGCCTCGCGCC...

Zm00001d024507_T001 from maize genome v4

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRALADNSRSFRLPTYLHERLVA
IRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYH
GIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARREHLDALLEEY

Nucleotide Sequence
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CACCAATGGGCAATGGCCTCGCGCC...

Zm00001eb415360_T001 from maize genome v5

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

Nucleotide Sequence
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GAGGGGGAAGACGAGGCCACAAGGC...

Zm00001eb415360_T002 from maize genome v5

Amino Acid Sequence
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MTATPAVIGLSAGNRLLATSFGSAELASPDAYPSRQFAAAAPKLTVVAHRASASASSPANIGGAGHARAHAIRALRNHSA
PALAPPPPADPAPELDSKFEFESSLEAIVLLQRSMLEKQWELPFEDDISSTEDEDEDERSTVVVARSGVSARQRRMSGRR
RGAVVGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQLAQSLRIPA
PELRARMRESFLAREMLAMSNTRLVISIAQKYDNLGVELPDLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRA
LADNSRSFRLPTYLHERLVAIRGAKYALEDQGIAPTVENIAESLNISEKKVHNATEAVHKVISLDQQAFPSLNGLPGDTL
HSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKL
KHAARREHLDALLEEY

Nucleotide Sequence
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GAGGGGGAAGACGAGGCCACAAGGC...


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